PDBsum entry 1njw Go to PDB code:  Tunnel analysis for: 1njw calculated with MOLE 2.0 PDB id 1njw Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.21 30.5 1.48 0.66 9.7 78 2 3 0 6 5 0 0   2 1.27 1.27 21.5 0.24 0.14 14.7 76 2 2 1 6 3 0 0   3 1.25 1.25 22.2 0.23 0.13 15.2 76 2 2 1 6 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.