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PDBsum entry 1nir
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Tunnel analysis for: 1nir calculated with  MOLE 2.0
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PDB id
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1nir
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.10 |
1.28 |
55.5 |
-1.54 |
-0.12 |
24.8 |
79 |
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10 |
4 |
3 |
7 |
5 |
0 |
0 |
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DHE 602 A OH 603 A
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2 |
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1.18 |
1.33 |
43.8 |
-1.40 |
-0.05 |
23.9 |
78 |
8 |
3 |
2 |
6 |
4 |
0 |
0 |
DHE 602 B OH 603 B
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3 |
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1.15 |
1.28 |
60.0 |
-1.68 |
-0.33 |
21.2 |
82 |
9 |
3 |
3 |
7 |
3 |
0 |
1 |
HEC 601 B DHE 602 B
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4 |
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1.20 |
1.32 |
21.8 |
-1.41 |
-0.44 |
12.6 |
88 |
3 |
1 |
3 |
2 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program