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PDBsum entry 1nez
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Pore analysis for: 1nez calculated with  MOLE 2.0
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PDB id
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1nez
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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9 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.18 |
2.91 |
40.4 |
-1.41 |
-0.31 |
12.2 |
87 |
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3 |
2 |
8 |
1 |
4 |
1 |
0 |
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2 |
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2.20 |
2.91 |
49.7 |
-1.51 |
-0.32 |
15.3 |
86 |
6 |
2 |
7 |
3 |
4 |
1 |
0 |
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3 |
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2.20 |
2.92 |
53.2 |
-1.50 |
-0.34 |
14.9 |
86 |
5 |
3 |
9 |
2 |
5 |
1 |
0 |
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4 |
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1.68 |
1.76 |
60.4 |
-1.32 |
-0.40 |
12.7 |
80 |
2 |
6 |
7 |
3 |
5 |
1 |
0 |
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5 |
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1.66 |
1.75 |
76.9 |
-2.00 |
-0.55 |
23.3 |
85 |
8 |
5 |
6 |
5 |
1 |
1 |
0 |
NAG 1070 G
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6 |
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1.78 |
2.04 |
76.7 |
-2.14 |
-0.45 |
26.0 |
80 |
7 |
3 |
3 |
4 |
2 |
1 |
0 |
NAG 1070 G
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program