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PDBsum entry 1ncc

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1ncc calculated with MOLE 2.0 PDB id
1ncc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.25 78.2 -1.72 -0.47 27.6 79 6 11 2 5 2 2 0  
2 1.41 16.7 -0.56 -0.47 10.5 87 1 2 4 3 0 0 0  
3 1.39 3.8 -2.30 -0.82 28.9 80 1 2 0 0 0 0 0  
4 1.94 5.8 0.11 -0.42 4.6 87 1 0 0 1 0 0 0  
5 1.73 4.9 -3.70 -0.45 43.5 81 3 2 0 0 1 0 0  
6 1.42 17.1 -2.64 -0.41 28.9 74 3 1 1 1 2 0 0  
7 1.48 5.1 -0.74 -0.42 13.6 87 0 1 1 1 0 0 0  
8 1.32 4.4 -2.66 -0.74 34.0 82 2 1 0 0 0 0 0  
9 1.46 9.1 -1.37 -0.40 5.8 72 2 0 1 1 2 1 0  
10 1.46 9.1 -2.15 -0.07 39.5 86 3 1 1 2 0 0 0  
11 1.86 6.4 -1.13 -0.10 18.6 94 1 1 1 1 0 0 0  
12 1.66 4.3 0.20 -0.40 2.7 101 0 0 2 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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