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PDBsum entry 1ncb

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1ncb calculated with MOLE 2.0 PDB id
1ncb
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 11 tunnels, coloured by tunnel radius 11 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.62 24.9 -1.96 -0.64 24.1 87 3 3 3 3 1 0 1  
2 1.59 6.8 -1.58 -0.79 2.2 107 0 0 3 0 0 0 0  
3 1.43 7.1 -1.44 -0.58 13.2 104 1 0 2 0 0 0 0  
4 1.69 7.6 -1.09 -0.42 17.4 83 0 2 0 2 0 1 0  
5 1.61 11.5 -2.36 -0.63 29.6 87 1 2 1 2 0 1 0  
6 1.72 9.6 -1.24 -0.44 9.9 72 1 0 3 0 2 0 0  
7 1.35 4.9 -0.78 -0.62 8.7 87 1 0 1 0 0 0 1  
8 1.69 8.3 -0.03 -0.43 5.5 86 1 0 0 2 0 1 0  
9 1.35 7.4 0.02 -0.01 2.7 81 0 0 1 3 1 0 0  
10 1.37 4.6 -1.43 -0.67 18.9 88 1 1 0 1 0 0 0  
11 1.33 5.3 0.06 -0.34 2.5 93 0 0 0 2 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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