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PDBsum entry 1n4r

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Pore analysis for: 1n4r calculated with MOLE 2.0 PDB id
1n4r
Pores calculated on whole structure Pores calculated excluding ligands

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19 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.25 3.55 25.5 -1.09 0.12 18.2 77 3 1 1 3 1 0 0  
2 2.86 2.93 43.4 -2.45 -0.64 30.8 89 9 4 3 2 0 0 0  
3 1.39 2.72 48.3 -2.58 -0.17 27.1 70 9 2 3 0 5 1 1  MES 904 G SO4 813 H GER 1408 P
4 2.42 2.42 70.2 -2.03 -0.49 27.4 78 8 8 4 2 3 0 0  
5 1.59 2.71 73.5 -2.11 -0.22 25.2 71 13 4 3 2 6 1 2  MES 902 C SO4 811 D GER 1208 N
6 1.46 1.57 73.4 -0.72 -0.08 20.5 78 8 9 3 10 5 0 1  
7 1.62 1.92 73.7 -2.74 -0.46 30.1 86 9 7 6 3 1 1 0  
8 3.75 4.35 77.4 -2.41 -0.55 30.8 77 9 11 6 1 4 0 0  
9 1.49 2.62 79.2 -2.59 -0.40 30.3 71 12 9 4 1 6 1 2  MES 903 E SO4 812 F GER 1308 O
10 1.44 2.63 79.6 -2.17 -0.37 26.6 72 13 6 2 2 5 1 2  MES 903 E SO4 812 F GER 1308 O
11 1.23 2.06 79.3 -2.32 -0.41 25.4 72 11 8 5 2 7 1 1  MES 902 C SO4 811 D GER 1208 N
12 1.16 2.16 101.7 -0.27 0.21 11.2 77 6 3 7 12 9 2 1  
13 1.73 2.63 99.7 -2.32 -0.21 26.4 76 15 5 5 2 6 3 1  MES 905 I SO4 814 J GER 1508 Q
14 1.21 2.04 109.1 -2.03 -0.32 24.3 73 14 9 7 2 9 1 1  MES 902 C SO4 811 D GER 1208 N
15 1.45 2.62 111.7 -1.99 -0.35 25.4 72 15 8 6 2 8 1 2  MES 903 E SO4 812 F GER 1308 O
16 1.26 2.05 121.1 -2.29 -0.28 24.8 70 17 8 7 2 11 2 2  MES 902 C SO4 811 D MES 903 E SO4 812 F GER 1208
N GER 1308 O
17 1.67 2.78 197.4 -2.32 -0.41 27.5 76 20 17 9 6 10 1 1  MES 906 K SO4 815 L GER 1608 R
18 1.44 1.63 201.9 -1.85 -0.42 25.9 80 17 20 9 10 6 0 1  
19 1.54 1.88 229.0 -2.08 -0.40 26.3 81 21 19 14 12 4 2 1  
20 1.47 1.66 247.9 -1.58 -0.36 21.1 84 19 15 18 16 4 2 2  
21 1.32 2.79 243.4 -2.05 -0.36 22.7 80 21 12 18 12 8 3 2  MES 906 K SO4 815 L GER 1608 R
22 1.43 1.55 274.2 -1.71 -0.38 23.3 83 26 19 18 17 6 2 2  CL 801 C
23 1.42 3.84 263.4 -1.98 -0.43 24.9 81 19 20 16 13 4 2 1  
24 1.54 1.90 269.7 -2.01 -0.37 24.2 79 28 16 18 13 10 3 2  MES 906 K SO4 815 L GER 1608 R

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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