PDBsum entry 1n4p Go to PDB code:  Pore analysis for: 1n4p calculated with MOLE 2.0 PDB id 1n4p Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   34 pores, coloured by radius 45 pores, coloured by radius 45 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.39 2.39 28.9 -2.35 -0.37 21.9 80 4 1 4 1 2 0 0   2 1.72 2.42 42.3 -1.70 -0.26 23.4 78 5 6 5 0 3 2 0   3 5.34 6.74 43.5 -3.07 -0.51 35.9 79 8 8 4 1 2 0 0   4 3.53 4.12 48.9 -1.42 -0.33 25.9 79 7 3 2 2 2 0 0   5 3.25 3.46 50.7 -1.19 -0.45 19.7 76 6 3 3 2 2 0 0   6 1.73 2.42 50.9 -2.21 -0.38 30.2 73 5 7 3 1 3 0 0   7 1.72 2.42 51.8 -1.84 -0.33 28.2 77 6 8 3 1 3 2 0   8 3.11 3.22 52.4 -2.97 -0.54 31.5 78 7 8 6 1 2 0 0   9 1.42 1.54 55.1 -0.50 -0.07 9.9 88 3 2 8 5 2 1 1   10 1.32 2.08 55.5 -2.47 -0.11 24.6 73 9 6 6 3 6 0 0  GRG 1723 F 11 1.47 1.93 64.3 -1.09 -0.10 16.0 85 7 4 8 5 3 1 0   12 1.33 2.40 66.9 -2.16 -0.12 27.7 74 11 8 5 5 6 0 0  GRG 1723 F 13 1.29 1.66 69.5 -1.43 0.05 23.3 78 12 2 5 6 5 1 1   14 1.31 2.10 77.6 -2.48 -0.24 27.4 74 10 10 8 5 6 0 0  GRG 1723 F 15 1.88 2.23 80.6 -2.00 -0.46 27.1 80 10 7 5 4 3 0 0   16 1.47 3.73 84.2 -2.03 -0.06 24.7 73 12 7 5 6 6 1 1  GRG 1722 D 17 1.55 2.92 86.9 -1.75 -0.07 25.7 71 10 9 5 6 7 1 1  GRG 1722 D 18 1.89 2.24 90.0 -2.43 -0.56 25.4 85 10 5 9 4 2 0 0   19 1.43 1.88 93.9 -2.16 -0.15 26.3 73 12 10 8 7 6 1 1  GRG 1722 D 20 1.46 3.76 100.6 -2.13 -0.44 22.0 83 11 6 9 5 4 0 0  GRG 1726 L 21 1.42 3.86 99.9 -2.17 -0.34 24.7 79 13 8 7 4 7 0 0  GRG 1726 L 22 1.59 1.74 111.8 -2.51 -0.57 33.5 83 12 10 5 2 3 0 0   23 1.44 1.48 130.3 -1.57 -0.39 22.2 87 11 9 9 8 2 0 1   24 1.38 4.11 141.3 -2.72 -0.50 29.9 80 14 12 11 5 6 0 0  GRG 1726 L 25 1.41 1.47 170.8 -2.07 -0.46 27.7 84 14 15 11 8 4 0 1   26 1.51 1.82 175.3 -2.34 -0.51 25.0 86 18 12 15 6 3 1 0   27 1.50 1.82 212.0 -2.39 -0.60 27.3 86 18 14 15 7 3 1 0   28 1.67 2.75 28.2 -3.01 -0.50 36.8 74 3 5 2 0 2 0 0   29 2.60 2.67 30.8 -2.78 -0.60 34.3 88 9 2 2 1 0 0 0   30 1.48 1.63 32.8 -0.88 -0.07 15.2 86 3 2 3 3 2 1 0   31 1.55 2.53 33.5 -2.25 0.03 26.2 73 8 2 2 2 4 0 0  GRG 1724 H 32 1.49 1.63 33.5 -1.89 -0.67 16.2 92 6 1 4 1 0 1 0   33 1.57 1.96 33.9 -2.64 -0.25 29.7 84 5 4 4 3 1 1 0   34 1.56 1.82 35.7 -2.46 -0.27 24.4 84 5 4 4 3 2 1 0   35 1.16 1.26 36.3 -0.88 0.17 12.6 73 3 2 4 3 5 1 0   36 1.22 1.93 49.1 -2.13 -0.08 20.9 75 9 3 6 3 5 0 0  GRG 1724 H 37 1.46 3.90 55.1 -2.35 -0.17 28.1 74 7 9 5 5 4 0 0  GRG 1721 B 38 1.40 1.68 55.2 -1.95 -0.14 25.3 80 10 5 6 4 4 0 0   39 1.43 1.65 59.4 -0.99 -0.01 16.4 84 7 4 8 5 4 1 0   40 1.81 2.97 90.9 -2.95 -0.72 34.0 84 9 12 9 2 2 0 0   41 1.57 1.82 94.3 -2.66 -0.54 31.6 84 9 13 7 6 1 1 0   42 1.43 1.56 30.9 -2.41 -0.21 27.1 83 6 4 3 2 1 1 0   43 1.17 1.91 32.9 -0.88 -0.14 15.1 85 3 2 3 2 3 0 0   44 1.41 2.55 86.5 -2.00 -0.18 24.8 80 14 5 5 4 5 1 0  GRG 1725 J GER 1727 M 45 1.38 3.90 121.5 -2.03 -0.30 23.8 81 14 9 10 7 6 1 0  GRG 1725 J GER 1727 M Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.