PDBsum entry 1n4m Go to PDB code:  Tunnel analysis for: 1n4m calculated with MOLE 2.0 PDB id 1n4m Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.08 2.34 47.4 -0.45 -0.11 13.2 88 3 6 7 9 1 1 0   2 1.05 2.22 47.1 -0.62 -0.05 16.7 83 5 4 3 8 1 1 0   3 1.62 1.76 16.7 -0.06 -0.24 11.3 89 1 1 0 4 0 0 0   4 1.34 1.92 16.6 -0.40 0.12 21.7 80 4 1 0 3 0 1 0   5 1.32 2.54 17.2 1.89 0.71 4.4 77 1 1 1 7 1 0 0   6 1.14 2.89 19.5 1.51 0.38 7.8 79 1 2 0 6 1 0 0   7 1.32 2.54 21.9 1.57 0.42 8.1 84 2 2 0 7 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.