 |
PDBsum entry 1n2c
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1n2c calculated with MOLE 2.0
|
PDB id
|
|
|
|
1n2c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
6 pores,
coloured by radius |
 |
11 pores,
coloured by radius
|
11 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.55 |
3.18 |
42.5 |
-2.54 |
-0.41 |
28.6 |
73 |
 |
8 |
5 |
1 |
1 |
2 |
2 |
0 |
 |
|
 |
 |
2 |
 |
1.87 |
2.02 |
45.9 |
-2.13 |
-0.42 |
22.9 |
79 |
8 |
4 |
2 |
2 |
2 |
2 |
0 |
|
 |
3 |
 |
1.53 |
3.20 |
52.1 |
-2.51 |
-0.80 |
30.0 |
86 |
9 |
9 |
7 |
2 |
0 |
0 |
0 |
|
 |
4 |
 |
1.73 |
1.76 |
58.0 |
-2.90 |
-0.76 |
37.5 |
84 |
8 |
10 |
2 |
1 |
0 |
0 |
0 |
|
 |
5 |
 |
1.32 |
1.30 |
64.1 |
-1.57 |
-0.51 |
17.8 |
83 |
7 |
7 |
3 |
6 |
2 |
2 |
0 |
ADP 291 F ALF 293 F
|
 |
6 |
 |
1.25 |
2.39 |
89.9 |
-2.06 |
-0.72 |
25.4 |
84 |
6 |
13 |
5 |
3 |
1 |
0 |
0 |
|
 |
7 |
 |
1.37 |
2.60 |
92.0 |
-2.15 |
-0.73 |
26.0 |
84 |
8 |
13 |
6 |
3 |
1 |
0 |
0 |
|
 |
8 |
 |
1.26 |
1.47 |
125.9 |
-1.88 |
-0.71 |
20.6 |
84 |
8 |
13 |
6 |
4 |
1 |
2 |
0 |
ADP 291 E ALF 293 E
|
 |
9 |
 |
1.23 |
1.24 |
126.1 |
-1.95 |
-0.72 |
21.5 |
84 |
9 |
13 |
6 |
5 |
0 |
2 |
0 |
ADP 291 G ALF 293 G
|
 |
10 |
 |
1.24 |
2.23 |
131.5 |
-1.85 |
-0.61 |
22.4 |
83 |
10 |
17 |
7 |
7 |
2 |
2 |
0 |
ADP 291 E ALF 293 E
|
 |
11 |
 |
1.24 |
1.33 |
133.6 |
-1.95 |
-0.65 |
23.3 |
84 |
12 |
17 |
8 |
8 |
1 |
2 |
0 |
ADP 291 G ALF 293 G
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |