spacer
spacer

PDBsum entry 1ms7

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1ms7 calculated with MOLE 2.0 PDB id
1ms7
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 1.70 28.5 -0.12 -0.24 7.1 84 0 2 3 1 3 0 0  
2 1.29 1.33 41.8 -0.85 -0.32 19.2 83 4 3 2 4 0 0 0  
3 1.75 1.85 113.0 -1.88 -0.42 28.9 78 9 12 3 4 4 0 0  ZN 3003 A
4 1.49 1.98 128.0 -1.63 -0.50 23.6 83 10 10 6 7 1 2 0  ZN 3003 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer