PDBsum entry 1mk4 Go to PDB code:  Pore analysis for: 1mk4 calculated with MOLE 2.0 PDB id 1mk4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.54 1.55 32.9 -1.43 -0.08 21.3 78 7 4 2 5 2 1 0   2 2.04 3.95 35.6 -0.39 0.07 8.8 74 3 0 4 3 2 2 0   3 1.34 4.86 40.0 -1.52 0.06 21.2 73 7 3 3 3 3 2 0   4 1.33 4.88 43.0 -0.48 0.25 13.8 75 4 3 3 4 5 1 0   5 1.55 2.74 57.5 -1.33 -0.01 18.0 72 8 5 3 4 4 3 0   6 1.39 4.81 59.4 -1.28 0.15 18.8 71 9 7 1 5 5 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.