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PDBsum entry 1miu

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1miu calculated with MOLE 2.0 PDB id
1miu
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.99 20.4 -2.15 -0.65 20.1 80 3 3 5 0 0 2 2  HG 103 A
2 1.55 2.12 20.5 -2.14 -0.63 19.6 80 3 3 5 0 0 2 2  HG 103 A
3 1.61 1.75 16.3 1.06 0.21 1.1 82 0 0 5 7 2 0 0  
4 1.60 1.77 19.0 1.88 0.31 3.8 84 1 2 2 10 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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