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PDBsum entry 1mi5

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1mi5 calculated with MOLE 2.0 PDB id
1mi5
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.22 3.46 25.2 -1.12 -0.45 13.7 86 3 2 0 3 0 2 0  
2 2.11 2.26 40.0 -0.40 -0.14 7.7 86 1 4 7 4 2 1 0  
3 2.20 3.62 70.1 -2.01 -0.44 25.6 79 6 5 5 5 2 2 0  
4 2.11 2.12 41.6 -1.53 -0.15 15.0 75 2 2 3 2 7 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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