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PDBsum entry 1mey
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Tunnel analysis for: 1mey calculated with  MOLE 2.0
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PDB id
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1mey
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.40 |
1.41 |
19.3 |
-1.19 |
-0.66 |
11.2 |
86 |
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4 |
0 |
3 |
0 |
1 |
0 |
0 |
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DC 7 D DA 8 D DG 9 D
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2 |
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1.35 |
1.35 |
39.8 |
-1.57 |
-0.68 |
16.1 |
86 |
7 |
1 |
4 |
0 |
2 |
0 |
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DA 4 D DG 5 D DG 6 D DC 7 D DA 8 D DG 9 D
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3 |
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1.50 |
1.51 |
15.1 |
-0.83 |
-0.47 |
9.6 |
84 |
3 |
0 |
2 |
0 |
1 |
0 |
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DA 8 A DG 9 A DA 10 A
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4 |
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1.35 |
1.62 |
18.7 |
-1.40 |
-0.77 |
11.4 |
87 |
4 |
1 |
2 |
0 |
0 |
0 |
0 |
DC 7 A DA 8 A
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5 |
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1.19 |
1.19 |
34.5 |
-1.68 |
-0.75 |
16.0 |
91 |
6 |
1 |
3 |
0 |
0 |
0 |
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DA 4 A DG 5 A DG 6 A DC 7 A DA 8 A
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6 |
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1.25 |
1.27 |
17.9 |
-2.91 |
-0.51 |
24.1 |
81 |
2 |
1 |
3 |
0 |
1 |
0 |
0 |
DG 9 D DG 3 E DT 4 E DT 5 E DC 6 E
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program