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PDBsum entry 1md4

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1md4 calculated with MOLE 2.0 PDB id
1md4
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.28 15.2 1.17 0.33 2.4 75 0 1 2 6 1 0 0  
2 1.27 19.5 1.06 0.29 1.6 74 0 0 2 6 2 0 0  
3 1.57 6.4 -0.09 -0.53 2.7 99 0 0 2 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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