spacer
spacer

PDBsum entry 1m9x

Go to PDB code: 
Top Page protein Protein-protein interface(s) links
Isomerase/viral protein PDB id
1m9x
Jmol
Contents
Protein chains
165 a.a. *
146 a.a. *
135 a.a. *
Waters ×1496
* Residue conservation analysis
procheck   Generate full PROCHECK analyses

PROCHECK summary for 1m9x

Ramachandran plot

PROCHECK statistics

1. Ramachandran Plot statistics


                                         No. of
                                        residues     %-tage
                                         ------      ------
Most favoured regions      [A,B,L]          887       88.2%*  
Additional allowed regions [a,b,l,p]        115       11.4%          
Generously allowed regions [~a,~b,~l,~p]      2        0.2%          
Disallowed regions         [XX]               2        0.2%*  
                                           ----      ------
Non-glycine and non-proline residues       1006      100.0%

End-residues (excl. Gly and Pro)             14

Glycine residues                            130
Proline residues                             70
                                           ----
Total number of residues                   1220


Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good quality model would be expected to have over 90% in the most favoured regions [A,B,L].


2. G-Factors

                                                Average
Parameter                            Score       Score
---------                            -----       -----
Dihedral angles:-
     Phi-psi distribution            -0.12      
     Chi1-chi2 distribution          -0.03      
     Chi1 only                        0.17      
     Chi3 & chi4                      0.41      
     Omega                           -0.43      
                                                  -0.12      
                                                  =====
Main-chain covalent forces:-
     Main-chain bond lengths          0.34      
     Main-chain bond angles          -0.31      
                                                  -0.03      
                                                  =====

     OVERALL AVERAGE                              -0.07      
                                                  =====

G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.

Values below -0.5*  - unusual
Values below -1.0** - highly unusual
Important note: The main-chain bond-lengths and bond angles are compared with the Engh & Huber (1991) ideal values derived from small-molecule data. Therefore, structures refined using different restraints may show apparently large deviations from normality.