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PDBsum entry 1m9e

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 1m9e calculated with MOLE 2.0 PDB id
1m9e
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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19 tunnels, coloured by tunnel radius 19 tunnels, coloured by tunnel radius 19 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.59 21.6 -1.66 -0.23 17.5 80 1 1 2 2 1 3 0  
2 2.58 22.7 -1.20 0.11 11.2 64 2 1 0 2 2 4 0  
3 2.56 23.0 -2.19 -0.21 12.5 78 3 1 3 1 1 3 0  
4 2.49 24.4 -1.11 -0.05 13.1 75 2 1 2 3 1 4 0  
5 2.62 25.0 -1.08 0.05 12.6 69 2 1 1 2 2 6 0  
6 2.59 27.3 -1.28 0.01 12.3 72 3 1 2 2 2 6 0  
7 2.41 28.0 -2.03 -0.26 17.4 79 3 1 4 1 1 3 0  
8 2.45 28.6 -2.18 -0.31 17.4 78 3 1 5 1 1 3 0  
9 2.56 29.0 -1.64 -0.05 26.6 72 2 4 1 3 2 3 0  
10 1.60 35.7 -0.55 0.26 14.3 69 3 1 1 3 3 7 0  
11 2.50 39.7 -1.30 0.06 24.6 74 5 5 1 4 2 3 0  
12 2.15 42.2 -0.79 -0.05 19.8 82 4 1 2 4 1 3 0  
13 2.00 42.8 -1.95 -0.07 25.8 73 5 4 1 3 2 4 0  
14 2.14 42.9 -0.98 -0.11 20.1 85 4 1 3 4 1 4 0  
15 2.23 43.7 -0.97 -0.10 15.5 73 6 1 2 3 2 7 0  
16 1.74 4.8 0.76 -0.08 4.0 83 0 1 0 3 1 0 0  
17 2.80 12.1 0.41 -0.11 4.6 70 2 0 0 0 2 0 0  
18 2.04 5.2 -1.06 -0.41 14.8 83 1 1 0 3 0 1 0  
19 1.28 10.7 -0.05 -0.41 4.5 77 1 1 1 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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