spacer
spacer

PDBsum entry 1m4z

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 1m4z calculated with MOLE 2.0 PDB id
1m4z
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.01 2.01 29.5 -0.82 -0.23 10.6 87 1 3 4 3 2 0 0  
2 1.80 3.18 38.0 -1.91 -0.49 29.3 79 5 10 2 2 0 0 0  
3 2.01 3.58 59.0 -1.51 -0.55 13.6 86 1 8 10 7 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer