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PDBsum entry 1m19
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Pore analysis for: 1m19 calculated with  MOLE 2.0
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PDB id
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1m19
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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19 pores,
coloured by radius |
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23 pores,
coloured by radius
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23 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.81 |
2.95 |
27.1 |
-1.60 |
-0.53 |
16.4 |
92 |
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4 |
0 |
5 |
2 |
1 |
0 |
0 |
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DC 101 I DA 102 I DA 187 J DA 188 J
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2 |
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1.25 |
1.25 |
30.1 |
-1.70 |
-0.57 |
15.7 |
74 |
2 |
0 |
0 |
0 |
0 |
1 |
0 |
DG 63 I DT 64 I DT 65 I DC 66 I DA 67 I DG 68 I
DC 69 I DG 70 I DG 71 I DA 145 I BAL 1970 I DIB
1971 I DG 224 J DC 225 J DT 226 J DG 227 J DA 228
J DA 231 J DT 232 J DG 233 J
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3 |
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3.08 |
3.08 |
30.3 |
-2.03 |
-0.66 |
24.4 |
75 |
5 |
1 |
1 |
0 |
0 |
0 |
0 |
DA 28 I DA 102 I DG 103 I DT 104 I DG 185 J DA
187 J DA 188 J DA 261 J
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4 |
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3.89 |
3.89 |
31.4 |
-1.60 |
-0.68 |
18.1 |
77 |
2 |
0 |
1 |
0 |
0 |
0 |
0 |
DG 58 I DG 59 I DA 133 I DG 134 I DG 135 I DT 136
I MN 703 I DA 153 J DT 154 J DC 155 J DC 156 J DA
157 J DC 158 J DA 231 J DT 232 J
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5 |
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2.52 |
2.52 |
31.8 |
-0.53 |
-0.65 |
7.0 |
101 |
1 |
0 |
2 |
3 |
0 |
0 |
0 |
DT 20 I DT 21 I DC 22 I DT 23 I DC 26 I DC 193 J
DT 194 J DC 195 J DG 267 J DT 269 J DA 270 J DG
271 J BAL 2010 J
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6 |
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3.74 |
3.74 |
33.7 |
-1.64 |
-0.64 |
16.9 |
95 |
3 |
0 |
5 |
1 |
0 |
0 |
0 |
DC 9 I DC 10 I DG 18 I DT 92 I DA 279 J DG 280 J
DT 288 J DT 289 J MN 702 J
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7 |
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3.43 |
3.56 |
35.9 |
-1.97 |
-0.51 |
23.9 |
84 |
8 |
3 |
3 |
2 |
1 |
0 |
0 |
DA 28 I DA 102 I DG 185 J DA 261 J
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8 |
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2.63 |
2.63 |
39.4 |
-1.19 |
-0.67 |
11.8 |
87 |
4 |
0 |
2 |
1 |
1 |
0 |
0 |
DC 26 I DC 101 I DA 102 I DG 103 I DT 104 I DA
187 J DA 188 J DG 192 J DC 193 J DT 194 J DC 195
J DG 271 J BAL 2010 J DIB 2011 J
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9 |
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3.38 |
4.05 |
40.5 |
-1.44 |
-0.71 |
14.0 |
88 |
4 |
1 |
4 |
1 |
0 |
0 |
0 |
DC 132 I DA 133 I DG 134 I MN 703 I DC 155 J DC
156 J DA 157 J DC 158 J DG 164 J
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10 |
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3.52 |
3.85 |
40.6 |
-1.72 |
-0.71 |
19.0 |
85 |
3 |
1 |
2 |
1 |
0 |
0 |
0 |
DG 58 I DG 59 I DG 134 I DG 135 I DA 153 J DG 164
J DA 231 J DT 232 J DT 239 J
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11 |
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2.58 |
2.79 |
42.0 |
-1.51 |
-0.65 |
13.8 |
96 |
4 |
0 |
7 |
1 |
1 |
0 |
0 |
DG 40 I DA 41 I DA 42 I DT 48 I DG 164 J DC 247 J
DG 249 J
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12 |
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2.63 |
2.63 |
48.3 |
-1.58 |
-0.61 |
19.3 |
78 |
8 |
3 |
0 |
1 |
1 |
0 |
0 |
DC 26 I DA 28 I DA 102 I DG 103 I DT 104 I DG 185
J DG 192 J DC 193 J DT 194 J DC 195 J DA 261 J DG
271 J BAL 2010 J DIB 2011 J
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13 |
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1.65 |
1.65 |
51.5 |
-1.21 |
-0.75 |
13.4 |
81 |
2 |
1 |
0 |
0 |
0 |
0 |
0 |
DG 58 I DG 59 I DC 60 I DA 61 I DG 134 I DG 135 I
DA 153 J DA 231 J DT 232 J DT 236 J DT 237 J DT
238 J DT 239 J
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14 |
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1.50 |
1.50 |
56.3 |
-1.22 |
-0.51 |
11.7 |
73 |
5 |
0 |
0 |
1 |
0 |
3 |
0 |
DA 4 I DA 5 I DT 8 I DT 80 I DG 81 I DA 213 J DG
214 J DC 215 J DG 216 J DT 288 J DT 289 J DA 291
J DT 292 J
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15 |
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1.80 |
2.00 |
56.9 |
-1.47 |
-0.48 |
19.4 |
78 |
5 |
0 |
0 |
2 |
0 |
1 |
0 |
DT 8 I DG 71 I DA 72 I DT 74 I DT 75 I DC 215 J
DG 216 J DG 217 J DT 226 J DT 288 J DT 289 J DG
290 J MN 704 J
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16 |
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2.50 |
2.85 |
56.9 |
-1.45 |
-0.76 |
17.4 |
75 |
5 |
2 |
1 |
0 |
0 |
0 |
0 |
DT 37 I DT 38 I DG 40 I DA 41 I DA 42 I DA 113 I
DC 114 I MN 710 I ABU 2025 I DA 174 J DA 175 J DT
184 J DG 185 J DC 247 J DG 249 J DT 250 J DT 251
J DC 260 J DA 261 J ABU 1905 J
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17 |
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1.76 |
3.13 |
59.7 |
-1.16 |
-0.73 |
9.6 |
91 |
3 |
0 |
5 |
1 |
0 |
0 |
0 |
DT 48 I DA 51 I DT 52 I DA 61 I DG 164 J DT 236 J
DT 237 J DT 239 J DG 240 J
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18 |
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1.58 |
1.69 |
64.2 |
-1.18 |
-0.44 |
15.3 |
77 |
5 |
0 |
0 |
2 |
0 |
2 |
0 |
DA 4 I DA 5 I DG 71 I DA 72 I DT 80 I DG 81 I DA
213 J DG 214 J DC 215 J DG 216 J DT 226 J DA 291
J DT 292 J
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19 |
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2.44 |
2.86 |
64.2 |
-1.47 |
-0.65 |
16.6 |
91 |
7 |
3 |
8 |
1 |
1 |
0 |
0 |
DT 37 I DT 38 I DT 48 I DA 113 I PYB 2024 I ABU
2025 I DG 164 J DT 184 J DG 185 J DC 260 J DA 261
J PYB 1904 J ABU 1905 J
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20 |
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2.53 |
3.19 |
77.6 |
-1.87 |
-0.29 |
19.9 |
88 |
9 |
4 |
13 |
3 |
5 |
3 |
0 |
DT 48 I DA 102 I DG 164 J
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21 |
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1.61 |
1.64 |
83.7 |
-1.84 |
-0.67 |
21.2 |
92 |
6 |
2 |
4 |
2 |
0 |
0 |
0 |
DT 48 I DT 130 I DG 131 I DA 133 I DG 134 I DA
163 J DG 164 J DA 165 J DT 166 J DT 167 J
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22 |
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2.26 |
2.26 |
84.0 |
-1.12 |
-0.65 |
11.5 |
90 |
5 |
2 |
7 |
1 |
1 |
0 |
0 |
DT 36 I DT 37 I DT 38 I DT 48 I DT 112 I DA 113 I
DC 114 I PYB 2023 I PYB 2024 I ABU 2025 I PYB
2026 I PYB 2027 I DG 164 J DA 175 J DT 182 J DT
183 J DT 184 J DC 260 J DA 261 J PYB 1903 J PYB
1904 J ABU 1905 J PYB 1906 J
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23 |
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1.74 |
1.74 |
92.8 |
-1.77 |
-0.51 |
21.2 |
77 |
11 |
1 |
2 |
4 |
0 |
3 |
0 |
DG 68 I DC 69 I DG 71 I DA 72 I DA 73 I DC 132 I
DA 133 I DG 134 I DT 142 I DT 143 I DG 144 I MN
703 I DC 155 J DC 156 J DA 157 J DC 158 J DA 219
J DT 220 J
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program