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PDBsum entry 1ltk

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Pore analysis for: 1ltk calculated with MOLE 2.0 PDB id
1ltk
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.69 1.93 31.6 -2.11 -0.43 24.3 87 4 3 4 1 1 0 0  GOL 614 A SO4 606 B
2 1.20 1.21 31.9 -0.11 -0.15 11.3 82 3 3 4 4 2 0 0  MSE 311 B AMP 502 B
3 1.66 1.91 42.7 -1.83 -0.43 21.8 85 6 3 4 4 1 0 0  GOL 614 A SO4 606 B
4 1.37 1.56 47.7 -1.26 -0.27 14.5 82 4 3 2 1 1 2 0  SO4 604 C
5 1.72 2.00 52.8 -1.82 -0.38 24.8 79 9 4 4 6 2 0 0  AMP 501 A SO4 605 A GOL 614 A
6 1.89 1.89 55.9 -2.03 -0.56 27.6 80 10 8 3 3 0 0 0  
7 1.96 3.35 61.2 -2.07 -0.45 31.9 77 11 6 2 6 1 0 0  AMP 501 A
8 1.37 1.58 66.9 -1.57 -0.25 21.4 78 5 5 1 2 1 2 0  AMP 503 C
9 1.81 2.34 67.8 -2.79 -0.58 33.1 82 10 11 5 3 1 0 0  GOL 614 A
10 1.91 1.97 76.1 -2.09 -0.53 29.8 79 12 10 4 7 1 0 0  AMP 501 A
11 1.28 1.44 77.5 -0.14 -0.10 13.7 78 8 2 4 11 2 0 0  MSE 189 C
12 1.63 1.63 77.0 -0.97 -0.44 11.2 80 5 4 5 4 4 1 0  AMP 502 B
13 2.30 2.88 75.8 -3.05 -0.62 34.8 82 6 7 3 2 1 1 0  AMP 503 C SO4 604 C
14 2.05 3.73 92.7 -2.24 -0.65 21.2 82 6 5 5 2 0 1 0  MSE 269 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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