spacer
spacer

PDBsum entry 1lo5

Go to PDB code: 
Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 1lo5 calculated with MOLE 2.0 PDB id
1lo5
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.45 13.5 -0.37 0.28 4.2 76 1 0 1 3 1 1 0  
2 1.52 16.1 0.08 -0.01 11.8 78 2 1 2 5 1 0 0  
3 1.74 18.4 -1.12 -0.12 17.6 73 2 1 3 2 2 0 1  
4 1.93 11.1 -0.28 0.04 10.2 86 0 1 1 2 1 0 0  
5 1.87 11.3 -1.12 -0.42 15.8 88 0 1 1 1 1 0 0  
6 1.30 8.3 2.94 0.73 0.7 95 0 0 1 4 0 0 1  
7 1.46 6.0 2.11 0.29 1.6 83 0 0 0 4 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer