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PDBsum entry 1lnd

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Cleft analysis for: 1lnd PDB id
1lnd
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1684.12 1.67 64.77 4 10.88 1 9.80 1 4 4 8 9 7 2 0 VAL 1321[E], LYS 1322[E] (17 atoms)
2 1007.44 0.00 58.16 7 10.54 2 8.98 2 1 6 3 5 1 3 0  
3 671.20 0.00 58.65 6 7.66 3 6.41 9 4 1 4 2 1 1 0  
4 735.33 0.00 65.14 3 6.53 6 6.66 7 2 2 3 4 4 7 0  
5 562.78 0.00 56.17 8 5.06 7 8.12 3 1 3 1 4 4 0 0  
6 692.72 0.00 65.89 2 5.04 8 6.95 6 4 3 3 6 3 1 0  
7 418.08 0.00 69.70 1 7.47 4 7.18 5 3 1 2 2 3 1 0  
8 386.02 0.00 63.56 5 7.22 5 7.48 4 1 1 6 0 2 2 0  
9 378.42 0.00 52.15 9 3.06 9 6.23 10 1 1 5 1 1 3 0  
10 297.42 0.00 49.29 10 2.85 10 6.54 8 2 2 1 1 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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