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PDBsum entry 1lk9

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1lk9 calculated with MOLE 2.0 PDB id
1lk9
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.36 21.6 -0.83 -0.20 14.7 80 4 3 2 2 3 0 0  
2 1.34 30.6 -1.56 -0.54 22.1 78 5 3 2 1 2 0 0  
3 1.34 30.7 -1.73 -0.56 24.7 80 4 3 4 1 2 0 0  
4 1.75 7.6 -1.02 0.22 15.9 82 2 1 1 2 2 0 0  
5 1.88 8.1 -1.43 -0.69 20.6 78 3 1 0 1 0 0 0  906 SO4 A
6 1.72 13.2 -2.93 -0.51 39.6 74 3 1 0 1 1 0 0  
7 1.35 18.6 -0.56 -0.21 7.7 62 1 1 1 3 2 5 0  
8 2.00 11.3 -2.20 -0.09 12.3 68 1 1 1 0 2 0 0  
9 1.95 12.4 -2.48 -0.24 15.7 65 1 1 1 0 3 0 0  
10 1.38 12.9 -1.83 -0.01 8.6 68 1 0 2 0 2 0 0  
11 1.25 12.7 -0.78 0.12 20.1 69 2 0 0 0 2 1 1  
12 1.27 13.5 -1.11 0.10 23.7 70 3 0 0 0 2 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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