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PDBsum entry 1l9m

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) links
Protein chain A    -    representing identical chain: B PDB id
1l9m
Protein chain A highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
9 sheets
1 beta alpha beta unit
14 beta hairpins
16 beta bulges
36 strands
15 helices
17 helix-helix interacs
56 beta turns
4 gamma turns
Catalytic residues
D353-C272-H330-Y525
Variants
Thr12Lys
Arg664Trp
His416Asp
Gly649Glu
Arg268Gln
Ser248Asn
Leu686Val
Ile162Leu
PROSITE
TRANSGLUTAMIN
ASES
  
Chain & (675 residues)

UniProt code: Q08188 (TGM3_HUMAN)   [Pfam]   [Ensembl gene]

structural classification (4 domains) :
Domain Links CATH no.   Class Architecture
1 2.60.40.10 = Mainly Beta Sandwich
2 3.90.260.10 = Alpha Beta Alpha-Beta Complex
3 2.60.40.10 = Mainly Beta Sandwich
4 2.60.40.10 = Mainly Beta Sandwich

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
CSA annotation:   
    catalytic residue
Human variant:   
    variant residue
Residue contacts:   
    to metal
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


Domain 3
Topology diagram


Hera


Domain 4
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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