spacer
spacer

PDBsum entry 1l7f

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 1l7f calculated with MOLE 2.0 PDB id
1l7f
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
9 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.55 22.2 -1.42 -0.55 21.7 86 3 4 2 3 0 0 1  801 BCZ A
2 1.61 15.2 -2.37 -0.50 32.7 70 2 4 0 1 1 0 0  
3 1.58 15.8 -2.14 -0.64 29.9 73 2 4 0 2 1 0 0  
4 1.56 29.0 -2.09 -0.29 32.7 71 2 4 0 3 1 0 0  
5 1.56 29.7 -1.79 -0.39 29.1 74 2 4 0 4 1 0 0  
6 1.84 9.3 0.07 -0.39 6.0 91 1 0 0 3 0 0 0  
7 1.53 6.6 -1.74 -0.11 17.4 75 1 1 1 1 1 0 0  
8 1.62 8.3 -2.82 -0.62 30.4 85 2 1 2 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer