PDBsum entry 1l3c Go to PDB code:  Tunnel analysis for: 1l3c calculated with MOLE 2.0 PDB id 1l3c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.65 1.65 31.8 -0.60 -0.24 11.4 83 3 1 5 6 0 2 0  MSE 172 C MSE 173 C 2 1.65 1.66 34.4 -1.35 -0.42 14.3 87 3 2 5 6 0 3 0  MSE 172 A MSE 173 A 3 1.13 2.47 36.1 -1.37 -0.47 14.3 89 2 3 4 6 0 2 0  MSE 173 A MSE 144 D 4 1.61 1.93 39.2 -1.49 -0.47 13.8 88 3 2 6 6 0 3 0  MSE 172 B MSE 173 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.