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PDBsum entry 1l0z

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protein metals links
Hydrolase PDB id
1l0z

 

 

 

 

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Contents
Protein chain
240 a.a. *
Metals
_XE
_NA
_BR ×32
Waters ×304
* Residue conservation analysis
PDB id:
1l0z
Name: Hydrolase
Title: The structure of porcine pancreatic elastase complexed with xenon and bromide, cryoprotected with dry paraffin oil
Structure: Elastase 1. Chain: a. Ec: 3.4.21.36
Source: Sus scrofa. Pig. Organism_taxid: 9823. Tissue: pancreas
Resolution:
1.50Å     R-factor:   0.166     R-free:   0.209
Authors: P.A.Tucker,S.Panjikar
Key ref:
S.Panjikar and P.A.Tucker (2002). Xenon derivatization of halide-soaked protein crystals. Acta Crystallogr D Biol Crystallogr, 58, 1413-1420. PubMed id: 12198297 DOI: 10.1107/S0907444902011010
Date:
14-Feb-02     Release date:   28-Aug-02    
PROCHECK
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 Headers
 References

Protein chain
P00772  (CELA1_PIG) -  Chymotrypsin-like elastase family member 1 from Sus scrofa
Seq:
Struc:
266 a.a.
240 a.a.
Key:    Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.4.21.36  - pancreatic elastase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Hydrolysis of proteins, including elastin. Preferential cleavage: Ala-|-Xaa.

 

 
DOI no: 10.1107/S0907444902011010 Acta Crystallogr D Biol Crystallogr 58:1413-1420 (2002)
PubMed id: 12198297  
 
 
Xenon derivatization of halide-soaked protein crystals.
S.Panjikar, P.A.Tucker.
 
  ABSTRACT  
 
Crystals of porcine pancreatic elastase can be derived by soaking in high-molarity bromide solutions. These crystals, either in a glycerol-based cryoprotectant solution or in paraffin oil, can be subsequently pressurized under a xenon atmosphere to incorporate xenon. When paraffin oil is used, a larger number of bromide ions are observed on the protein surface. Intensity data collected to lower energy than the bromine absorption edge can be used to determine the xenon position and the resultant phase information can be used to determine the bromine substructure from data collected to higher energy than the bromine absorption edge. The method would appear to have general applicability where large substructures need to be determined.
 
  Selected figure(s)  
 
Figure 1.
Figure 1 The Harker sections of the anomalous difference Patterson for (a) the Br-Xe-G1-W0.93 and (b) the Br-Xe-G1-W0.8 data set. The expected vector positions are marked with circles and the xenon (261) and bromide vectors are numbered as in Table 2-.
 
  The above figure is reprinted by permission from the IUCr: Acta Crystallogr D Biol Crystallogr (2002, 58, 1413-1420) copyright 2002.  
  Figure was selected by an automated process.  

 

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