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* Residue conservation analysis
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DOI no:
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Structure
10:687-699
(2002)
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PubMed id:
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Structures of two streptococcal superantigens bound to TCR beta chains reveal diversity in the architecture of T cell signaling complexes.
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E.J.Sundberg,
H.Li,
A.S.Llera,
J.K.McCormick,
J.Tormo,
P.M.Schlievert,
K.Karjalainen,
R.A.Mariuzza.
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ABSTRACT
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Superantigens (SAGs) crosslink MHC class II and TCR molecules, resulting in an
overstimulation of T cells associated with human disease. SAGs interact with
several different surfaces on MHC molecules, necessitating the formation of
multiple distinct MHC-SAG-TCR ternary signaling complexes. Variability in
SAG-TCR binding modes could also contribute to the structural heterogeneity of
SAG-dependent signaling complexes. We report crystal structures of the
streptococcal SAGs SpeA and SpeC in complex with their corresponding TCR beta
chain ligands that reveal distinct TCR binding modes. The SpeC-TCR beta chain
complex structure, coupled with the recently determined SpeC-HLA-DR2a complex
structure, provides a model for a novel T cell signaling complex that precludes
direct TCR-MHC interactions. Thus, highly efficient T cell activation may be
achieved through structurally diverse strategies of TCR ligation.
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Selected figure(s)
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Figure 3.
Figure 3. Diverse TCR b Chain Molecular Surface Burial by
Bacterial SuperantigensMolecular surface of (A) hVb2.1 buried by
SpeC, (B) mVb8.2 buried by SpeA, and (C) mVb8.2 buried by SEB.
Colors are as follows: CDR1 buried molecular surface, red; CDR2
and associated FR buried molecular surface, green; HV4 and
associated FR buried molecular surface, yellow; CDR3 buried
molecular surface, blue.
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The above figure is
reprinted
by permission from Cell Press:
Structure
(2002,
10,
687-699)
copyright 2002.
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Figure was
selected
by the author.
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Literature references that cite this PDB file's key reference
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PubMed id
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Reference
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M.Saline,
K.E.Rödström,
G.Fischer,
V.Y.Orekhov,
B.G.Karlsson,
and
K.Lindkvist-Petersson
(2010).
The structure of superantigen complexed with TCR and MHC reveals novel insights into superantigenic T cell activation.
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Nat Commun,
1,
119.
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PDB codes:
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N.Kowalsman,
and
M.Eisenstein
(2009).
Combining interface core and whole interface descriptors in postscan processing of protein-protein docking models.
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Proteins,
77,
297-318.
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Y.Ou,
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Y.Liu,
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H.Wang,
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and
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(2009).
An improved design of PCR primers for detection of human T cell receptor beta chain repertoire.
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Mol Biol Rep,
36,
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A.Shulman-Peleg,
M.Shatsky,
R.Nussinov,
and
H.J.Wolfson
(2007).
Spatial chemical conservation of hot spot interactions in protein-protein complexes.
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BMC Biol,
5,
43.
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B.Moza,
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R.A.Buonpane,
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D.M.Kranz,
and
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(2007).
Structural basis of T-cell specificity and activation by the bacterial superantigen TSST-1.
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EMBO J,
26,
1187-1197.
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PDB code:
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E.J.Sundberg,
L.Deng,
and
R.A.Mariuzza
(2007).
TCR recognition of peptide/MHC class II complexes and superantigens.
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Semin Immunol,
19,
262-271.
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M.M.Fernández,
S.Bhattacharya,
M.C.De Marzi,
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M.Kerzic,
P.Schuck,
R.A.Mariuzza,
and
E.L.Malchiodi
(2007).
Superantigen natural affinity maturation revealed by the crystal structure of staphylococcal enterotoxin G and its binding to T-cell receptor Vbeta8.2.
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Proteins,
68,
389-402.
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S.Günther,
A.K.Varma,
B.Moza,
K.J.Kasper,
A.W.Wyatt,
P.Zhu,
A.K.Rahman,
Y.Li,
R.A.Mariuzza,
J.K.McCormick,
and
E.J.Sundberg
(2007).
A novel loop domain in superantigens extends their T cell receptor recognition site.
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J Mol Biol,
371,
210-221.
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PDB codes:
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M.M.Fernández,
R.Guan,
C.P.Swaminathan,
E.L.Malchiodi,
and
R.A.Mariuzza
(2006).
Crystal structure of staphylococcal enterotoxin I (SEI) in complex with a human major histocompatibility complex class II molecule.
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J Biol Chem,
281,
25356-25364.
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PDB code:
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D.Law,
M.Hotchko,
and
L.Ten Eyck
(2005).
Progress in computation and amide hydrogen exchange for prediction of protein-protein complexes.
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Proteins,
60,
302-307.
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H.Li,
S.Van Vranken,
Y.Zhao,
Z.Li,
Y.Guo,
L.Eisele,
and
Y.Li
(2005).
Crystal structures of T cell receptor (beta) chains related to rheumatoid arthritis.
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Protein Sci,
14,
3025-3038.
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PDB codes:
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J.Janin
(2005).
Assessing predictions of protein-protein interaction: the CAPRI experiment.
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Protein Sci,
14,
278-283.
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M.Hahn,
M.J.Nicholson,
J.Pyrdol,
and
K.W.Wucherpfennig
(2005).
Unconventional topology of self peptide-major histocompatibility complex binding by a human autoimmune T cell receptor.
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Nat Immunol,
6,
490-496.
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PDB code:
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P.Carter,
V.I.Lesk,
S.A.Islam,
and
M.J.Sternberg
(2005).
Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI.
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Proteins,
60,
281-288.
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H.M.Baker,
T.Proft,
P.D.Webb,
V.L.Arcus,
J.D.Fraser,
and
E.N.Baker
(2004).
Crystallographic and mutational data show that the streptococcal pyrogenic exotoxin J can use a common binding surface for T-cell receptor binding and dimerization.
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J Biol Chem,
279,
38571-38576.
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PDB codes:
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K.Petersson,
G.Forsberg,
and
B.Walse
(2004).
Interplay between superantigens and immunoreceptors.
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Scand J Immunol,
59,
345-355.
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M.C.De Marzí,
M.M.Fernández,
E.J.Sundberg,
L.Molinero,
N.W.Zwirner,
A.S.Llera,
R.A.Mariuzza,
and
E.L.Malchiodi
(2004).
Cloning, expression and interaction of human T-cell receptors with the bacterial superantigen SSA.
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Eur J Biochem,
271,
4075-4083.
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C.J.Camacho,
and
D.W.Gatchell
(2003).
Successful discrimination of protein interactions.
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Proteins,
52,
92-97.
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D.W.Ritchie
(2003).
Evaluation of protein docking predictions using Hex 3.1 in CAPRI rounds 1 and 2.
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Proteins,
52,
98.
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J.Fernández-Recio,
M.Totrov,
and
R.Abagyan
(2003).
ICM-DISCO docking by global energy optimization with fully flexible side-chains.
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Proteins,
52,
113-117.
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J.Janin,
and
B.Séraphin
(2003).
Genome-wide studies of protein-protein interaction.
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Curr Opin Struct Biol,
13,
383-388.
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J.Janin,
K.Henrick,
J.Moult,
L.T.Eyck,
M.J.Sternberg,
S.Vajda,
I.Vakser,
and
S.J.Wodak
(2003).
CAPRI: a Critical Assessment of PRedicted Interactions.
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Proteins,
52,
2-9.
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L.Krippahl,
J.J.Moura,
and
P.N.Palma
(2003).
Modeling protein complexes with BiGGER.
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Proteins,
52,
19-23.
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T.J.Tripp,
J.K.McCormick,
J.M.Webb,
and
P.M.Schlievert
(2003).
The zinc-dependent major histocompatibility complex class II binding site of streptococcal pyrogenic exotoxin C is critical for maximal superantigen function and toxic activity.
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Infect Immun,
71,
1548-1550.
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T.Proft,
P.D.Webb,
V.Handley,
and
J.D.Fraser
(2003).
Two novel superantigens found in both group A and group C Streptococcus.
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Infect Immun,
71,
1361-1369.
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W.Swietnicki,
A.M.Barnie,
B.K.Dyas,
and
R.G.Ulrich
(2003).
Zinc binding and dimerization of Streptococcus pyogenes pyrogenic exotoxin C are not essential for T-cell stimulation.
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J Biol Chem,
278,
9885-9895.
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The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
Where a reference describes a PDB structure, the PDB
codes are
shown on the right.
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}
}
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