PDBsum entry 1kyi Go to PDB code:  Pore analysis for: 1kyi calculated with MOLE 2.0 PDB id 1kyi Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.63 2.05 46.4 -2.35 -0.73 24.6 81 8 9 3 2 2 2 0  ATP 453 D 2 2.92 2.92 52.7 -2.34 -0.46 34.2 81 13 11 1 4 2 0 0   3 2.52 2.84 69.6 -2.31 -0.48 27.1 82 9 8 5 4 2 2 0   4 3.02 3.15 70.8 -2.43 -0.51 34.4 82 15 12 2 4 2 0 0   5 2.49 2.63 90.6 -1.76 -0.46 23.0 84 11 7 4 8 2 2 0   6 3.04 3.24 104.9 -1.66 -0.40 26.2 85 16 8 1 10 2 0 0   7 3.03 3.24 109.4 -1.87 -0.44 28.1 84 19 9 2 9 2 0 0   8 3.18 3.36 109.4 -1.89 -0.45 28.1 84 19 10 2 9 2 0 0   9 3.05 3.23 113.7 -2.41 -0.49 32.0 83 16 13 5 5 2 0 0   10 2.48 2.68 118.0 -1.74 -0.47 23.6 84 15 9 5 9 2 2 0   11 2.60 2.84 130.0 -1.76 -0.46 24.1 84 16 9 5 10 2 2 0   12 3.08 3.27 141.2 -1.85 -0.47 26.3 85 20 10 6 8 1 0 0   13 2.79 4.58 141.4 -2.09 -0.55 28.1 86 21 14 8 7 1 0 0   14 2.79 4.58 145.5 -1.87 -0.52 25.9 86 22 12 7 9 1 0 0   15 3.05 3.36 146.4 -1.77 -0.46 26.2 85 20 11 6 9 1 0 0   16 1.71 1.74 150.3 -1.54 -0.46 24.4 86 14 13 6 11 0 0 0  LVS 175 M LVS 175 N 17 3.27 3.40 152.5 -1.94 -0.47 27.1 84 19 13 5 10 2 0 0   18 2.79 4.67 159.1 -2.04 -0.53 27.9 86 23 13 8 8 1 0 0   19 2.48 2.48 161.8 -1.73 -0.48 22.7 85 18 10 9 9 1 2 0   20 2.79 4.64 162.3 -2.13 -0.54 28.5 86 24 13 8 8 1 0 0   21 2.54 2.93 161.9 -1.91 -0.49 24.2 85 15 12 8 10 2 2 0   22 2.00 2.00 169.5 -3.01 -0.59 36.1 82 26 12 9 4 0 0 0   23 1.73 1.92 171.7 -1.60 -0.51 23.7 87 10 16 8 11 0 0 0  LVS 175 M LVS 175 R 24 1.77 1.90 189.6 -1.89 -0.52 27.4 83 16 13 6 12 1 1 0  LVS 175 R 25 1.57 1.57 204.8 -1.52 -0.44 24.2 86 15 15 8 14 1 0 0  LVS 175 M LVS 175 N LVS 175 O 26 2.79 4.61 217.1 -2.13 -0.55 27.4 86 25 16 11 10 1 0 0   27 1.78 1.89 280.7 -1.64 -0.44 24.5 86 24 20 13 17 2 0 0  LVS 175 H LVS 175 M LVS 175 R 28 1.78 1.93 281.1 -1.87 -0.44 26.9 85 27 19 8 16 3 1 0  LVS 175 H LVS 175 M LVS 175 R 29 1.26 1.93 353.7 -1.79 -0.43 25.1 85 32 23 15 20 4 1 0  LVS 175 H LVS 175 M LVS 175 R 30 1.86 1.88 350.5 -1.92 -0.48 27.0 86 34 22 14 18 2 1 0  LVS 175 H LVS 175 R Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.