 |
PDBsum entry 1kwo
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1kwo calculated with  MOLE 2.0
|
PDB id
|
|
|
|
1kwo
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
22 pores,
coloured by radius |
|
25 pores,
coloured by radius
|
25 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.19 |
1.38 |
30.8 |
1.95 |
0.63 |
2.7 |
72 |
|
0 |
3 |
0 |
7 |
4 |
0 |
1 |
|
|
 |
|
2 |
 |
1.18 |
1.30 |
33.9 |
0.80 |
0.35 |
11.1 |
72 |
1 |
3 |
0 |
6 |
3 |
1 |
1 |
|
|
3 |
 |
1.22 |
1.21 |
40.6 |
1.62 |
0.48 |
7.4 |
72 |
1 |
4 |
0 |
7 |
5 |
1 |
1 |
|
|
4 |
 |
1.23 |
1.43 |
47.5 |
-0.04 |
-0.10 |
11.9 |
79 |
3 |
2 |
3 |
6 |
2 |
0 |
0 |
|
|
5 |
 |
1.23 |
1.23 |
54.1 |
0.74 |
0.07 |
6.0 |
81 |
2 |
3 |
2 |
16 |
0 |
2 |
1 |
|
|
6 |
 |
1.81 |
2.02 |
57.5 |
-0.65 |
-0.19 |
16.3 |
88 |
3 |
6 |
8 |
6 |
2 |
1 |
1 |
MG 903 A AGS 999 A
|
|
7 |
 |
1.33 |
1.38 |
65.8 |
-0.49 |
-0.32 |
13.0 |
82 |
4 |
3 |
1 |
4 |
3 |
0 |
0 |
|
|
8 |
 |
1.41 |
2.01 |
75.1 |
0.08 |
0.10 |
13.2 |
82 |
4 |
5 |
8 |
12 |
4 |
1 |
1 |
MG 903 A AGS 999 A
|
|
9 |
 |
1.24 |
1.48 |
76.4 |
-0.68 |
-0.20 |
13.5 |
80 |
5 |
3 |
5 |
10 |
3 |
0 |
0 |
|
|
10 |
 |
1.17 |
1.36 |
81.4 |
-0.27 |
-0.13 |
11.1 |
78 |
3 |
3 |
3 |
8 |
3 |
2 |
1 |
|
|
11 |
 |
1.28 |
1.42 |
90.8 |
-1.73 |
-0.60 |
24.8 |
84 |
5 |
11 |
6 |
6 |
0 |
0 |
0 |
|
|
12 |
|
1.35 |
1.39 |
112.0 |
-1.30 |
-0.50 |
24.3 |
80 |
4 |
11 |
4 |
8 |
0 |
0 |
1 |
|
|
13 |
|
1.15 |
1.39 |
116.8 |
-0.83 |
-0.20 |
14.0 |
85 |
5 |
7 |
12 |
8 |
6 |
2 |
0 |
MG 903 A AGS 999 A
|
|
14 |
|
1.85 |
2.08 |
122.6 |
-1.36 |
-0.47 |
18.1 |
90 |
7 |
7 |
9 |
8 |
2 |
0 |
0 |
PDM 900 A MG 903 A AGS 999 A
|
|
15 |
|
1.16 |
1.30 |
125.7 |
-1.05 |
-0.15 |
19.9 |
73 |
5 |
8 |
2 |
7 |
5 |
4 |
1 |
|
|
16 |
|
1.27 |
1.46 |
131.2 |
-1.19 |
-0.34 |
20.7 |
79 |
7 |
12 |
8 |
12 |
3 |
0 |
0 |
|
|
17 |
|
1.34 |
1.36 |
145.1 |
-1.05 |
-0.34 |
16.5 |
86 |
8 |
7 |
8 |
11 |
5 |
0 |
0 |
PDM 900 A MG 903 A AGS 999 A
|
|
18 |
|
1.30 |
1.47 |
155.1 |
-1.18 |
-0.44 |
20.5 |
81 |
7 |
13 |
5 |
10 |
3 |
0 |
0 |
|
|
19 |
|
1.18 |
1.39 |
159.6 |
-0.59 |
-0.19 |
14.6 |
83 |
6 |
5 |
7 |
10 |
5 |
1 |
0 |
PDM 900 A
|
|
20 |
|
1.97 |
2.39 |
158.6 |
-1.36 |
-0.40 |
19.6 |
81 |
7 |
8 |
4 |
6 |
3 |
3 |
1 |
PDM 900 A
|
|
21 |
|
1.16 |
1.17 |
171.5 |
-0.62 |
-0.19 |
17.9 |
76 |
6 |
13 |
6 |
15 |
5 |
2 |
2 |
|
|
22 |
|
1.36 |
1.30 |
181.1 |
-1.10 |
-0.28 |
18.5 |
78 |
8 |
8 |
3 |
9 |
6 |
3 |
1 |
PDM 900 A
|
|
23 |
|
1.20 |
1.39 |
182.2 |
-0.43 |
-0.07 |
14.2 |
80 |
7 |
5 |
6 |
13 |
8 |
1 |
0 |
PDM 900 A
|
|
24 |
|
1.52 |
1.61 |
30.8 |
-1.61 |
-0.55 |
15.0 |
79 |
3 |
3 |
2 |
1 |
1 |
1 |
0 |
|
 |
25 |
|
1.17 |
1.95 |
33.1 |
-0.48 |
0.24 |
18.7 |
71 |
2 |
2 |
1 |
4 |
2 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program