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PDBsum entry 1kvq

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Tunnel analysis for: 1kvq calculated with MOLE 2.0 PDB id
1kvq
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.28 27.7 -1.49 -0.36 14.9 82 2 1 3 2 2 0 0  NAD 340 A
2 1.28 1.28 44.8 -0.92 -0.12 10.6 84 2 2 6 4 4 1 0  NAD 340 A UPG 341 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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