PDBsum entry 1kqb Go to PDB code:  Pore analysis for: 1kqb calculated with MOLE 2.0 PDB id 1kqb Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 2.33 50.3 -0.32 0.07 14.3 80 4 5 2 6 3 0 0   2 1.56 1.67 53.0 -2.13 -0.50 25.2 84 9 5 4 1 2 0 0  FMN 520 C BEZ 523 D 3 1.24 2.34 61.0 -1.61 -0.13 19.8 84 9 4 5 1 4 0 0  FMN 520 C BEZ 523 D 4 1.84 2.03 62.0 -0.23 0.03 13.2 81 4 4 4 6 4 0 0  BEZ 524 A FMN 519 B 5 1.24 1.37 68.4 -0.83 -0.08 16.6 81 5 6 3 6 4 0 0   6 1.53 2.42 70.8 -1.06 -0.27 18.3 84 10 5 6 6 3 0 0  FMN 520 C BEZ 523 D 7 1.27 1.50 85.0 -1.23 -0.45 17.4 87 8 5 6 9 2 0 0  FMN 518 A BEZ 525 B 8 1.68 2.10 26.6 0.08 0.06 13.4 81 2 3 3 4 3 0 0  BEZ 522 C FMN 521 D 9 1.69 1.91 31.4 -2.16 -0.39 24.4 83 7 1 5 2 2 0 0  FMN 521 D 10 1.37 1.37 37.4 -0.53 -0.19 16.4 83 1 2 2 4 2 0 0   11 1.67 2.10 38.9 -0.10 0.12 11.6 81 2 2 2 5 5 0 0  BEZ 522 C FMN 521 D 12 1.70 2.10 40.4 0.13 0.10 10.8 80 2 3 4 7 5 0 0  BEZ 522 C FMN 521 D 13 1.68 1.92 43.6 -1.07 -0.27 17.5 84 7 3 6 4 3 0 0  BEZ 522 C FMN 521 D 14 1.37 1.38 51.0 -1.93 -0.36 23.8 84 9 3 5 1 3 0 0  BEZ 522 C FMN 521 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.