spacer
spacer

PDBsum entry 1kop

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 1kop PDB id
1kop
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 4364.72 1.62 60.04 7 10.64 2 14.39 1 12 8 20 11 3 8 0 SO4 312[B] (5 atoms)
2 2690.30 0.00 63.62 4 7.52 5 11.69 3 10 8 17 10 5 9 0 AZI 306[B], BME 304[B] (6 atoms)
3 1982.39 0.00 64.36 3 8.56 3 11.76 2 8 4 11 7 4 7 0 AZI 305[A], BME 303[A] (7 atoms)
4 901.12 0.00 57.38 10 6.07 10 8.20 4 6 2 5 4 1 2 0 SO4 311[A] (5 atoms)
5 781.31 0.00 62.60 5 6.15 9 7.80 5 3 2 4 6 2 3 0  
6 681.75 0.00 57.55 9 7.62 4 7.00 7 1 3 4 4 1 3 0  
7 818.86 0.00 66.15 2 6.92 7 7.21 6 2 2 10 1 2 5 1  
8 681.33 0.00 59.14 8 7.46 6 6.76 9 2 1 6 3 1 3 0  
9 594.84 0.00 71.58 1 6.76 8 6.92 8 2 1 3 7 2 3 0  
10 581.34 0.00 60.17 6 10.93 1 5.76 10 5 1 1 4 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer