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PDBsum entry 1kn2

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1kn2 calculated with MOLE 2.0 PDB id
1kn2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 2.13 17.1 -0.37 -0.43 6.2 95 1 0 5 1 1 0 0  
2 1.13 2.38 21.2 0.01 -0.28 5.8 87 1 0 4 4 1 0 0  
3 1.11 1.27 16.1 -0.07 -0.42 2.4 78 0 0 3 3 1 2 1  
4 1.27 3.08 17.2 -0.82 0.04 24.3 73 3 2 0 3 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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