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PDBsum entry 1khq

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Cleft analysis for: 1khq PDB id
1khq
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1397.67 1.40 62.23 5 8.30 3 10.15 1 1 1 8 5 7 5 3 LEU 251[I], PHE 252[I], GLY 253[I],
0HQ 254[I] (24 atoms)
2 998.16 0.00 59.12 9 8.88 2 7.07 3 3 1 6 6 2 2 0  
3 880.45 0.00 61.71 7 5.67 5 8.37 2 3 3 2 1 2 3 2  
4 937.83 0.00 60.78 8 6.39 4 6.62 4 4 2 4 5 4 4 0  
5 285.19 0.00 62.00 6 5.43 7 5.66 7 2 1 0 3 2 2 0  
6 280.12 0.00 66.02 2 4.74 8 5.26 8 1 0 3 2 1 5 2  
7 245.11 0.00 71.04 1 10.76 1 5.87 6 2 1 4 1 2 3 0  
8 224.44 0.00 65.32 3 4.23 9 0.00 10 2 0 3 3 2 0 0  
9 183.52 0.00 53.73 10 2.07 10 5.25 9 1 0 1 1 2 2 0  
10 136.27 0.00 64.52 4 5.65 6 6.03 5 2 0 0 2 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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