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PDBsum entry 1kgs

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Cleft analysis for: 1kgs PDB id
1kgs
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 4504.78 4.06 61.13 4 10.47 3 16.02 1 12 11 11 18 4 6 0 SCN 306[A] (2 atoms)
2 1108.69 0.00 55.23 9 9.75 4 9.52 2 4 1 2 3 3 0 0  
3 1242.00 0.00 62.72 3 11.68 2 7.64 4 7 2 5 3 2 2 0  
4 744.19 0.00 57.39 8 8.46 5 8.23 3 5 2 0 2 1 2 0  
5 477.56 0.00 65.83 1 5.31 7 7.04 5 3 2 3 3 1 0 0  
6 314.72 0.00 64.93 2 12.25 1 0.00 10 6 3 0 1 0 1 1  
7 310.92 0.00 59.89 7 6.10 6 6.00 9 3 1 2 3 0 0 0  
8 341.72 0.00 60.93 6 2.85 10 6.80 7 1 1 0 4 2 0 0  
9 278.44 0.00 61.01 5 3.36 9 6.85 6 1 2 0 3 1 1 0  
10 222.33 0.00 51.04 10 4.17 8 6.03 8 3 1 0 0 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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