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PDBsum entry 1kfv

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Top Page protein dna_rna ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 1kfv PDB id
1kfv
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 6964.31 1.00 67.80 3 13.44 2 17.10 1 15 3 9 9 7 7 0 GOL 302[B] (6 atoms)
2 6950.81 0.00 68.96 2 11.86 3 15.86 2 15 4 9 11 6 7 0 GOL 301[A] (6 atoms)
3 6695.16 0.00 61.97 8 10.74 4 13.64 4 22 20 16 21 6 9 0  
4 4642.73 0.00 69.78 1 15.09 1 13.30 5 11 9 7 10 3 5 0  
5 5298.33 0.00 62.32 7 10.21 6 14.97 3 15 12 7 16 3 9 0  
6 747.56 0.00 66.91 4 8.33 7 6.29 10 6 4 3 5 1 1 0  
7 509.20 0.00 65.75 6 10.27 5 7.67 8 4 0 4 5 0 0 1  
8 640.41 0.00 50.80 9 3.33 10 6.94 9 0 0 0 0 0 0 0  
9 458.16 0.00 49.81 10 3.69 9 8.19 6 0 0 0 0 0 0 0  
10 386.44 0.00 66.71 5 6.94 8 7.72 7 2 3 2 2 1 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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