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PDBsum entry 1ken

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Viral protein/immune system PDB id
1ken
Contents
Protein chains
320 a.a. *
175 a.a. *
213 a.a. *
221 a.a. *
Ligands
NAG-NAG-MAN ×3
* Residue conservation analysis

References listed in PDB file
Key reference
Title An antibody that prevents the hemagglutinin low ph fusogenic transition.
Authors C.Barbey-Martin, B.Gigant, T.Bizebard, L.J.Calder, S.A.Wharton, J.J.Skehel, M.Knossow.
Ref. Virology, 2002, 294, 70-74.
PubMed id 11886266
Abstract
We have determined the structure of a complex of influenza hemagglutinin (HA) with an antibody that binds simultaneously to the membrane-distal domains of two HA monomers, effectively cross-linking them. The antibody prevents the low pH structural transition of HA that is required for its membrane fusion activity, providing evidence that a rearrangement of HA membrane-distal domains is an essential component of the transition.
Secondary reference #1
Title A neutralizing antibody FAB-Influenza haemagglutinin complex with an unprecedented 2:1 stoichiometry: characterization and crystallization.
Authors B.Gigant, C.Barbey-Martin, T.Bizebard, D.Fleury, R.Daniels, J.J.Skehel, M.Knossow.
Ref. Acta Crystallogr D Biol Crystallogr, 2000, 56, 1067-1069. [DOI no: 10.1107/S0907444900006776]
PubMed id 10944356
Full text Abstract
Figure 2.
Figure 2 Fit of the X31 BHA-HC63 Fab equilibrium sedimentation data. Equilibrium sedimentation data obtained at 4500 and 5200 rev min-1 were fitted to a monodisperse model. The open circles represent the data from the 4500 rev min-1 run and the solid line is the fit. The residuals representing the variation between the experimental data and those generated by the fit are also plotted (upper panel); the molecular weight deduced from the fit is 306 kDa (standard deviation is 1 kDa). Theoretical curves for absorbance versus radius based on the molecular weights of the 1:1 and the 3:1 Fab-BHA complexes are also plotted (lower panel). The data confirm the 2:1 Fab:(BHA trimer) stoichiometry observed in the structure.
The above figure is reproduced from the cited reference with permission from the IUCr
PROCHECK
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