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PDBsum entry 1kbb

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Tunnel analysis for: 1kbb calculated with MOLE 2.0 PDB id
1kbb
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.28 43.9 -0.71 0.03 18.7 84 4 4 2 9 4 0 0  498 CL A
2 1.30 46.5 -0.92 0.00 20.2 81 5 4 2 8 5 0 0  498 CL A
3 1.31 50.1 -0.68 0.10 16.8 79 4 4 3 9 6 0 0  498 CL A
4 1.27 51.0 -0.62 0.05 17.7 86 5 4 2 8 3 1 0  498 CL A
5 2.02 6.5 -3.18 -0.56 35.9 77 2 1 0 0 0 2 0  
6 1.70 5.4 -0.75 -0.39 4.7 77 1 0 1 1 1 0 0  
7 1.55 12.3 -1.23 -0.65 18.6 86 2 2 2 1 1 0 0  
8 1.65 10.0 -1.55 -0.49 25.6 73 2 3 0 1 1 0 0  
9 1.42 10.1 -1.31 -0.34 17.7 77 1 4 2 1 1 0 0  
10 1.77 8.8 -0.44 -0.34 9.3 75 1 0 0 1 1 0 0  1 PCA A
11 1.70 6.4 0.08 0.05 3.3 66 1 0 0 2 1 1 0  
12 1.69 8.2 -0.70 -0.15 7.7 74 1 0 1 2 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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