PDBsum entry 1kb9 Go to PDB code:  Pore analysis for: 1kb9 calculated with MOLE 2.0 PDB id 1kb9 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.76 1.75 28.5 -2.00 -0.54 29.9 91 6 3 2 1 0 0 0   2 0.99 1.20 51.7 -0.52 -0.26 15.6 88 3 4 3 6 0 0 0   3 1.98 2.23 70.8 -1.40 -0.31 16.2 83 5 4 4 7 1 3 0   4 1.99 2.22 73.2 0.25 0.40 9.3 78 8 1 3 12 7 0 0  PEF 510 C CDL 511 C 5 3.12 3.65 77.4 -1.97 -0.42 20.5 84 8 4 12 3 3 3 0   6 1.76 1.93 109.7 -0.55 -0.14 12.8 83 6 7 7 12 7 2 0  PCF 514 A UMQ 521 A PIE 508 C 7 0.99 1.20 135.5 -0.16 -0.11 15.5 84 8 7 4 18 1 2 1  HEM 503 D 8 1.48 1.91 133.4 -1.46 -0.37 19.2 82 9 5 7 8 2 5 0   9 1.57 1.93 134.6 -1.70 -0.36 18.2 77 8 5 7 6 3 5 0   10 2.57 3.15 134.8 -0.84 0.13 14.3 77 10 3 5 15 9 4 0  PEF 510 C CDL 511 C 11 1.41 1.86 154.1 -1.65 -0.44 20.4 84 13 8 10 8 2 5 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.