PDBsum entry 1k1f Go to PDB code:  Pore analysis for: 1k1f calculated with MOLE 2.0 PDB id 1k1f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.56 2.39 64.4 -2.62 -0.47 30.3 82 7 6 5 3 0 2 0  MSE 23 D MSE 56 D 2 1.49 1.59 84.7 -2.46 -0.53 32.0 79 10 9 3 5 1 2 0  MSE 23 D 3 1.31 1.45 88.6 -2.16 -0.51 24.5 76 8 6 4 4 2 3 0  MSE 23 G MSE 23 H 4 1.89 2.01 97.4 -2.51 -0.63 30.0 74 9 9 4 3 2 3 0  MSE 23 D MSE 23 H 5 1.33 1.40 110.5 -2.20 -0.65 25.6 78 10 9 6 3 1 3 0  MSE 23 D MSE 23 G 6 1.51 2.80 112.6 -2.88 -0.56 31.4 77 11 12 7 4 2 5 0  MSE 23 H 7 1.49 2.29 120.1 -2.50 -0.54 30.5 77 11 14 6 7 2 4 0  MSE 23 H 8 1.54 2.32 141.3 -2.41 -0.56 30.6 78 11 16 3 5 1 4 0  MSE 23 D 9 1.53 1.65 230.8 -2.06 -0.43 28.7 82 15 9 3 9 0 3 0  MSE 1 B MSE 1 D MSE 56 D 10 1.41 1.44 267.7 -2.08 -0.48 27.1 82 18 11 6 9 0 5 0  MSE 1 B MSE 1 D MSE 56 D MSE 23 G 11 1.61 2.37 273.1 -2.04 -0.48 28.4 81 14 14 4 8 0 4 0  MSE 1 B MSE 1 D MSE 56 D 12 1.32 1.33 26.6 -1.20 -0.48 22.9 83 1 3 0 3 0 1 0  MSE 1 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.