spacer
spacer

PDBsum entry 1k0r

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1k0r calculated with MOLE 2.0 PDB id
1k0r
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.21 3.57 30.1 0.04 -0.03 13.9 86 3 1 2 8 1 0 0  
2 2.67 2.92 53.0 -0.47 -0.02 18.7 83 4 2 1 7 1 1 0  
3 2.66 2.92 57.7 -1.69 -0.55 23.8 93 3 3 3 3 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer