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PDBsum entry 1k0e
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Tunnel analysis for: 1k0e calculated with  MOLE 2.0
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PDB id
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1k0e
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.49 |
1.79 |
22.1 |
-0.08 |
-0.07 |
12.1 |
84 |
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2 |
2 |
3 |
3 |
3 |
0 |
0 |
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TRP 601 A
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2 |
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1.23 |
2.00 |
20.7 |
-0.39 |
-0.29 |
8.6 |
89 |
1 |
1 |
4 |
4 |
0 |
0 |
0 |
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3 |
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1.23 |
2.00 |
23.4 |
-1.07 |
-0.40 |
14.6 |
83 |
2 |
1 |
2 |
3 |
0 |
0 |
0 |
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4 |
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1.64 |
1.74 |
15.5 |
-1.11 |
-0.47 |
15.9 |
86 |
2 |
1 |
2 |
2 |
0 |
0 |
0 |
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5 |
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1.44 |
1.65 |
25.1 |
0.09 |
-0.09 |
12.4 |
82 |
1 |
3 |
3 |
4 |
2 |
1 |
0 |
TRP 602 B
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6 |
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1.43 |
1.63 |
16.0 |
0.04 |
0.05 |
7.0 |
68 |
0 |
1 |
1 |
2 |
1 |
0 |
0 |
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7 |
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1.24 |
1.78 |
16.7 |
-1.51 |
-0.24 |
21.0 |
88 |
2 |
2 |
1 |
1 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program