PDBsum entry 1jvk Go to PDB code:  Tunnel analysis for: 1jvk calculated with MOLE 2.0 PDB id 1jvk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.80 15.6 -0.46 -0.31 1.9 74 0 0 1 0 2 2 1   2 1.47 1.78 16.5 -0.31 -0.22 1.9 80 0 0 1 1 2 2 0   3 1.46 1.78 18.6 -0.43 -0.31 4.3 83 0 1 2 2 2 2 0   4 1.46 1.78 21.1 -0.40 -0.39 2.7 79 1 0 2 1 2 2 0   5 1.43 1.43 26.8 -0.87 -0.42 11.7 83 2 2 2 2 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.