PDBsum entry 1jrb Go to PDB code:  Tunnel analysis for: 1jrb calculated with MOLE 2.0 PDB id 1jrb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.33 25.9 -1.78 -0.44 15.5 90 3 2 6 3 1 1 0  FMN 1312 A ORO 1313 A 2 1.28 1.28 27.3 -1.71 -0.57 13.8 91 3 1 7 2 0 1 0  FMN 1312 A ORO 1313 A 3 1.32 1.33 33.4 -0.99 -0.42 9.8 83 2 1 6 4 0 2 1  FMN 1312 A ORO 1313 A 4 1.34 1.34 35.1 -1.33 -0.67 12.8 94 3 3 7 3 0 1 0  FMN 1312 A ORO 1313 A 5 1.33 1.34 38.5 -1.42 -0.69 13.3 96 2 4 7 3 0 1 0  FMN 1312 A ORO 1313 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.