PDBsum entry 1jr3 Go to PDB code:  Pore analysis for: 1jr3 calculated with MOLE 2.0 PDB id 1jr3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.65 1.65 27.4 -1.72 -0.61 18.0 67 2 2 0 1 0 4 0   2 1.39 1.38 30.6 -1.63 -0.23 30.5 91 6 3 1 4 0 0 0   3 2.14 2.27 37.1 -1.68 -0.44 19.9 79 3 3 4 4 0 2 0   4 3.46 3.79 38.2 -1.11 -0.26 14.9 83 6 1 3 3 0 2 0   5 1.38 1.38 39.5 -1.75 -0.37 28.9 93 6 5 2 6 0 0 0   6 1.40 1.43 45.1 -1.96 -0.66 26.1 91 5 7 3 3 0 1 0   7 1.12 2.03 51.2 -0.74 -0.10 16.7 77 6 1 3 5 1 3 0   8 1.35 1.34 55.3 -2.18 -0.46 23.0 81 9 6 4 3 2 1 0  SO4 5500 C 9 1.30 1.76 78.9 -2.25 -0.52 24.3 83 6 8 4 4 2 3 0   10 1.49 1.73 84.0 -2.07 -0.50 25.0 82 5 7 4 5 2 5 0   11 1.28 1.74 91.1 -1.92 -0.48 22.0 85 8 6 5 6 2 3 0   12 1.37 1.39 94.2 -1.72 -0.42 21.0 87 8 5 7 7 2 5 0   13 1.29 1.75 95.7 -1.63 -0.39 18.2 84 5 5 4 5 2 4 0   14 3.36 4.26 100.9 -1.99 -0.48 25.6 85 12 13 5 6 2 4 0   15 2.00 4.61 105.2 -2.37 -0.55 26.3 83 11 6 9 5 2 1 0   16 1.34 1.76 109.6 -1.72 -0.39 21.9 85 10 10 3 6 2 3 0   17 1.97 4.64 127.1 -2.71 -0.55 28.3 82 9 9 7 2 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.