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PDBsum entry 1jqo

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1jqo calculated with MOLE 2.0 PDB id
1jqo
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 11 tunnels, coloured by tunnel radius 11 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.68 18.5 -1.01 -0.20 16.1 83 3 0 0 6 1 1 0  
2 1.68 21.1 -0.71 -0.10 17.8 78 2 1 0 7 1 1 0  
3 1.66 21.6 -0.60 -0.08 15.3 77 3 0 0 6 2 1 0  
4 1.29 22.7 -2.65 -0.60 26.8 84 4 2 2 1 1 1 0  
5 1.30 23.5 -2.75 -0.72 24.3 84 5 3 3 0 0 1 0  
6 1.66 24.2 -0.44 0.00 17.4 73 2 1 0 7 2 1 0  
7 1.29 24.4 -2.71 -0.67 22.8 85 6 1 3 1 0 1 0  
8 1.29 26.3 -2.19 -0.70 17.6 93 4 1 4 1 0 0 0  
9 1.90 9.4 0.78 0.66 12.4 75 1 1 0 5 1 0 0  
10 1.54 10.2 -0.50 -0.15 24.8 71 1 3 0 2 0 0 1  
11 1.93 3.7 -3.28 -0.84 43.1 79 2 2 0 0 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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