PDBsum entry 1jpn Go to PDB code:  Pore analysis for: 1jpn calculated with MOLE 2.0 PDB id 1jpn Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.57 176.0 -1.59 -0.34 25.8 80 13 13 4 13 1 2 0   2 1.24 1.50 188.8 -1.26 -0.28 23.0 78 13 11 4 15 2 2 0   3 1.29 1.55 34.8 1.09 0.35 12.9 82 2 3 0 8 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.