PDBsum entry 1jnq Go to PDB code:  Tunnel analysis for: 1jnq calculated with MOLE 2.0 PDB id 1jnq Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 2.20 67.2 -0.42 -0.05 15.7 82 6 6 6 13 4 0 0  EGT 871 A 2 1.18 1.46 47.9 -0.25 0.19 14.6 79 6 3 3 9 5 0 0   3 1.16 1.87 51.2 -0.48 0.10 13.5 78 3 3 3 10 5 1 0   4 1.20 1.44 15.1 -1.72 -0.55 15.9 80 2 1 1 2 0 2 0   5 1.22 1.43 20.4 0.11 0.28 19.5 74 2 2 0 6 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.