PDBsum entry 1jnl Go to PDB code:  Pore analysis for: 1jnl calculated with MOLE 2.0 PDB id 1jnl Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.22 4.09 38.4 -2.01 -0.71 18.0 79 2 3 2 1 0 2 0   2 3.28 4.03 42.5 -1.34 -0.51 17.0 75 2 3 2 3 0 3 0   3 1.03 1.52 46.0 -0.56 -0.41 7.6 88 1 2 6 2 1 2 0   4 1.00 1.51 52.8 -0.66 -0.38 12.1 87 3 2 6 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.